Question: Biobase library in R
0
gravatar for nazaninhoseinkhan
3.9 years ago by
Iran, Islamic Republic Of
nazaninhoseinkhan340 wrote:

Hi all,

I want to do t-test in R version 3.0.3 and I need library Biobase to do that. I get a warning message that package Biobase can not be installed on R vrsion 3.0.3.

How can I use this package? Is there any alternative to this package?

Thanks

Nazanin

R • 4.4k views
ADD COMMENTlink modified 10 months ago by biggg.marinebiologist0 • written 3.9 years ago by nazaninhoseinkhan340
1

for future question about Bioconductor you might consider to ask to their help website:

https://support.bioconductor.org/

ADD REPLYlink written 3.9 years ago by dago2.5k
2
gravatar for richard.deborja
3.9 years ago by
Canada
richard.deborja100 wrote:

"t.test" should be part of the core R libraries (package:stats) and should not require biobase.  What happens if you just type "t.test" at the R console?  I also just tried installing "biobase" from Bioconductor with no issues and I'm on R v3.1.2.  Did you follow the instructions listed on http://www.bioconductor.org/packages/release/bioc/html/Biobase.html?

 

ADD COMMENTlink written 3.9 years ago by richard.deborja100
0
gravatar for biggg.marinebiologist
10 months ago by
biggg.marinebiologist0 wrote:

in the name of allah hi to all, i problem to use of libraries Biobase and GEOquery in R version 3.4.3. it showed: "Error in library(Biobase) : there is no package called ‘Biobase’" for me. thanks

ADD COMMENTlink written 10 months ago by biggg.marinebiologist0

You have to install bioconductor before you can use Biobase. source("https://bioconductor.org/biocLite.R"); biocLite(); library(Biobase)

ADD REPLYlink modified 10 months ago by Sean Davis25k • written 10 months ago by russhh4.1k

thanks i think solve my problem. but i say install with "www" code at source("www.bioconductor.org/....) is false. the true is: "https://...... if not supported used: http://.....

ADD REPLYlink written 10 months ago by biggg.marinebiologist0
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