Question

Genome project workflow

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9.2 years ago

Mehmet ▴ 820

Dear All,

I would like to know the all steps of a genome project workflow. I will be working on a genome project next year. So, I need to know why and when we run some Bionformatics programs and tools in a genome project (genome annotate, assembly etc.). Could anyone please explain me the workflow of a genome projects?

Thanks

sequence genome Assembly • 1.9k views

ADD COMMENT • link updated 2.0 years ago by Ram 43k • written 9.2 years ago by Mehmet ▴ 820

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What is a genome project? NGS de novo assembly? Whole genome sequencing?

ADD REPLY • link updated 2.0 years ago by Ram 43k • written 9.2 years ago by Pierre Lindenbaum 161k

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NGS de novo assembly.

ADD REPLY • link updated 2.0 years ago by Ram 43k • written 9.2 years ago by Mehmet ▴ 820

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Prokaryote or Eukaryote?

ADD REPLY • link updated 2.0 years ago by Ram 43k • written 9.2 years ago by dago ★ 2.8k

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Eukaryote. Actually, We will have genome sequences of 5 different species, and compare these 5 sequences to 2 different species.

7 species belong to the same genus.

ADD REPLY • link updated 2.0 years ago by Ram 43k • written 9.2 years ago by Mehmet ▴ 820

Ram · Answer 1 · 2015-02-02

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9.2 years ago

dago ★ 2.8k

I am not experienced with that, but I found this paper really helpful:

A beginner's guide to eukaryotic genome annotation

ADD COMMENT • link updated 2.0 years ago by Ram 43k • written 9.2 years ago by dago ★ 2.8k