Local ancestry Inference
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9.4 years ago
Tark ▴ 50

I am trying to compare 100 kb region around a mutation in chr 21 between EUR , AFR and Americans. I need to use this region to construct haplotypes in Haploview and see what % of haplotypes are common in these population in this region and later need to see if any of these haplotype is found in my EUR samples to establish ancestry.

I need help whether this approach is right

snp next-gen-sequencing genome • 2.1k views
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How many individuals are you dealing with?

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400 individuals

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