i am doing microarray data analysis using R package. my doubt is regarding selection of DEG! whether i should consider p VALUE <0.05 or ADJUSTED p VALUE < 0.05 for selection of DEG?? i get adj p values >0.3. what should i do now? on what basis the threshold of p value or adj p value should be set??
yes,I got all those p values and adjusted p values. But the problem is , all adjusted p values are greater than 0.3. so how should i choose DEG?