The "snp" command works with only 1 snp, but if I type 2 SNPs, it does not, as from output below. VCF tools manual says snp <string> but how do I write the string of several SNPs? rs236330rs236330 or rs236330-rs236330?
I tried the command "snps" to include a list of SNPs from a file but it doesn't recognize the command
After filtering, kept 2504 out of 2504 Individuals
Outputting Frequency Statistics...
After filtering, kept 0 out of a possible 6468094 Sites
No data left for analysis!