Question: Trinotate SwissProt BlastX and BlastP
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gravatar for oliver.tills
4.1 years ago by
oliver.tills10
European Union
oliver.tills10 wrote:

Hi, I am running the most recent release of Trinotate (v2) and have a query. 

The SwissProt BlastP and BlastX output, in the final annotation report, looks different to how its looked in previous versions, in particular they are missing the SwissProt ID (sp| XXXXX) which in previous versions has prefixed the rest of the annotation details. Have I somehow messed up my annotation, or is this an intentional change to the output of Trinotate? 

Oli

Trinotate v2:

DYHC_DICDI^DYHC_DICDI^Q:5-262,H:2547-2632^54.02%ID^E:5e-19^RecName: Full=Dynein heavy chain, cytoplasmic;^Eukaryota; Amoe....

Trinotate_r20140708:

sp|P34036|DYHC_DICDI^P34036^Q:5-262,H:2547-2632^54.02%ID^E:1e-18^RecName: Full=Dynein heavy chain, cyto......

 

 

rna-seq trinotate annotation • 1.3k views
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