Question: downloading cds from ensembl biomart
0
gravatar for vigneshprbh37
5.3 years ago by
INDIA
vigneshprbh3730 wrote:

i want to download a cds sequence database from ensembl from biomart, but everytime i encounter a time out

can anyone tell me how to achieve this. the specs are

database: ensembl gene 78

dataset : mus musculus genes

attributes: sequenes > coding sequence

header: Ensembl Gene ID, Ensembl Transcript ID, coding sequence

 

 

cds biomart ensembl • 2.0k views
ADD COMMENTlink modified 5.3 years ago by Emily_Ensembl20k • written 5.3 years ago by vigneshprbh3730
0
gravatar for Emily_Ensembl
5.3 years ago by
Emily_Ensembl20k
EMBL-EBI
Emily_Ensembl20k wrote:

You don't need to use BioMart for this, the data is on the FTP site.

ADD COMMENTlink written 5.3 years ago by Emily_Ensembl20k
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