Question: Guide To Working With Repeated Elements
7
gravatar for Eric Fournier
7.8 years ago by
Eric Fournier1.4k
Quebec, Canada
Eric Fournier1.4k wrote:

Would anyone happen to know a good guide/review article/book about working with Repeated elements in bioinformatics? Personally, my knowledge of repeats come from bits and pieces I've put together from Wikipedia, my biology textbooks and the RepeatMasker manual. I've yet to find a single comprehensive ressource I can use as a "go to" reference for colleagues that are new to the subject.

Reviews about repeated elements at large could also be useful.

repeats literature books • 2.2k views
ADD COMMENTlink written 7.8 years ago by Eric Fournier1.4k
15
gravatar for Casey Bergman
7.8 years ago by
Casey Bergman18k
Athens, GA, USA
Casey Bergman18k wrote:

A trio of reviews on transposable element bioinformatics came out from 2007-2010 that cover this area fairly well:

See also a page on TE bioinformatics tools I maintain here: http://bergmanlab.smith.man.ac.uk/?page_id=295

ADD COMMENTlink written 7.8 years ago by Casey Bergman18k

Thanks, Casey. This is the kind of info that would be exceedingly difficult to find with contacting an expert and shows why BioStar is indeed a great resource. I intend to save these references myself.

ADD REPLYlink written 7.8 years ago by Larry_Parnell16k

Very useful! Thanks a lot.

ADD REPLYlink written 7.7 years ago by Eric Fournier1.4k

I'm beginning an annotation project and these are great resources. Thanks!

ADD REPLYlink written 7.7 years ago by David M550
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