Question: Download unspliced RefSeq genes
0
gravatar for Biomonika (Noolean)
4.1 years ago by
State College, PA, USA
Biomonika (Noolean)3.0k wrote:

I would like to download all genes and pseudogenes from RefSeq. Unspliced, with introns, preferably linked to GRCh38 release. GFF track would also be sufficient, provided that coordinates would match the particular release and hence sequences could be extracted. 

The online interface is is quite unpredictable, for example here:

http://www.ncbi.nlm.nih.gov/gene/9082

in section:

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

under

Genomic

after clicking at 

NC_000024.10 Reference GRCh38 Primary Assembly

FASTA

I am getting mRNA and not the whole sequence as expected since the link is in "Genomic" section. Any help will be appreciated.

refseq grch38 release gene • 1.1k views
ADD COMMENTlink written 4.1 years ago by Biomonika (Noolean)3.0k
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