Question: construct a phylogenetic tree from a set of local trees
0
gravatar for sam
4.0 years ago by
sam0
United States
sam0 wrote:

I have a set of gene trees consisting of a number of taxa. I'm interested in using those gene trees to infer a phylogenetic tree. What are some of the known methods which could be used to accomplish this task?

 

ADD COMMENTlink modified 4.0 years ago by David W4.7k • written 4.0 years ago by sam0

What's a local tree?

ADD REPLYlink written 4.0 years ago by David W4.7k

it is a gene tree

ADD REPLYlink written 4.0 years ago by sam0
0
gravatar for David W
4.0 years ago by
David W4.7k
New Zealand
David W4.7k wrote:

There are many different approaches to estimating species trees from gene trees. Depending on the scale of your problem, and how deep you want to get into it, you could look at STEM, ASTRAL or BUCKy.

 

ADD COMMENTlink written 4.0 years ago by David W4.7k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1762 users visited in the last hour