I am assembling an insect genome with SOAPdenovo and have my data in interleaved Fastq format. I can convert the interleaved files to paired files easily enough if I need to, but it's a big time/space inconvenience. Is it possible to run SOAPdenovo on interleaved Fastq files?
Question: Is it possible to use interleaved fastq data with SOAPdenovo?
4.3 years ago by
Daniel Standage ♦ 3.9k
Davis, California, USA
Daniel Standage ♦ 3.9k wrote:
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