Question: How to generate pair-wise alignments for all the orthologous gene pairs at once?
gravatar for kashifalikhan007
3.2 years ago by
kashifalikhan00740 wrote:

Hi everyone,

I want to calculate Ka/Ks value between two organism. For this I have to align pairwise each orthologs. I can align one pair at a time but I need to know how to align each pair at once. I have tabulated blast output which have the headers of each pair.

Please help me for this.

blast sequence alignment • 833 views
ADD COMMENTlink written 3.2 years ago by kashifalikhan00740

Please show an example of how your data look like.

ADD REPLYlink written 3.2 years ago by Biomonika (Noolean)3.0k
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