correlation between copy number alterations and expression in cgdsr
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9.0 years ago

How to make a correlation between copy number alterations and expression of a bunch of genes among all cancers using cgdsr library? A loop that will create a table with genes and cancers as rows and columns. The table would contain the correlation values between the expression and CNA absolute values.

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It would be helpful to tell us what you have tried and what has not worked for you.

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