Question: How to get copy number change co-ordinates for all cancers from cbioportal
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gravatar for sebastianzeki0
5.7 years ago by
United Kingdom
sebastianzeki0180 wrote:

I have discovered this from the TGCA which looks like a really useful resource.

http://www.cbioportal.org/index.do

However rather than letting me download all genes associated with copy number changes from a sequenced cancer I have to select the genes Im interested in and then it lets me download them. Ideally I want to be able to download all the genes for a particular cancer (even better all the genes associated with copy number changes). Is there a way of doing this ?perhaps with the R package they have also developed?

sequencing copy number genome • 1.1k views
ADD COMMENTlink written 5.7 years ago by sebastianzeki0180
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