Tool: Drug repositioning based on co-expressed gene set enrichment analysis, cogena
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gravatar for Zhilong Jia
4.7 years ago by
Zhilong Jia1.5k
London
Zhilong Jia1.5k wrote:

Cogena is a framework for co-expressed gene set enrichment analysis. It can be used for pathway/GO analysis or drug repositioning, etc. as smaller scale, but highly correlated cellular events may be of great biological relevance. See vignette of this package for the detail.

cogena

URLs:

https://github.com/zhilongjia/cogena

http://bioconductor.org/packages/devel/bioc/html/cogena.html

Comments and suggestions are welcome!

Citation: Jia, Zhilong, et al. "Cogena, a novel tool for co-expressed gene-set enrichment analysis, applied to drug repositioning and drug mode of action discovery." BMC Genomics 17.1 (2016): 1.

Thank you.

 

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