Is there any way to convert a METATOOLS model file to either SBML or .psc format? I am devising a way to parse it (kind of weird since there aren't standards for the pathway abbreviations...going to use KEGG pathways eventually). I was just wondering if anyone knows of any packages or tools online to convert these model files. This is an example of the METATOOLS model file.
-ENZREV GG2r GG5r GG6r GG7r GG8r GG9r GG10r PPP4r -ENZIRREV GG1 GG3 GG4 GG11 -METINT PEP G6P PYR F6P -METEXT O2_ext ETOH_ext ACE_ext NH3_ext -CAT GG1 : GLC_ext + PEP = G6P + PYR . GG2r : G6P = F6P . GG3 : F6P + ATP = F16BP + ADP . GG4 : F16BP = F6P . GG5r : F16BP = DHAP + GA3P .
Thank you! Your answer is helpful for another step that I will need (i.e. elementary mode analysis). I'm in the process of manually recreating the model file in the correct format but it's difficult b/c arbitrary names were used, not KEGG IDs or some other standard.