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9.0 years ago
Kurban
▴
230
Tried Trinity for de novo assembly, but it requires java 1.7:
kurban@kurban-X550VC:~/Desktop/Trinity$ ~/Downloads/trinityrnaseq-2.0.6/Trinity --seqType fq --left R1.fq --right R2.fq --CPU 3 --max_memory 3G
Error, Trinity requires access to Java version 1.7. Currently installed version is: java version "1.8.0_40"
Java(TM) SE Runtime Environment (build 1.8.0_40-b25)
Java HotSpot(TM) 64-Bit Server VM (build 25.40-b25, mixed mode)
kurban@kurban-X550VC:~/Desktop/Trinity$ rpm -qa jdk
kurban@kurban-X550VC:~/Desktop/Trinity$ sudo rpm -qa jdk
kurban@kurban-X550VC:~/Desktop/Trinity$
And I tried to remove my current version java fro several hours, now its almost dawn here, but I still could not remove it.
Have anybody encountered it before. Please give me some suggestions!