Question: Issues installing Delly
0
gravatar for from the mountains
4.8 years ago by
United States
from the mountains80 wrote:

I'd really prefer to have Delly on my Mac, but I'm having issues with the install. I DLed via directions on this site and "make all" would always get interrupted partway. I tried installing cmake and boost (through homebrew), which made the installation progress further, but not to the end. This is the error i'm at now: 

/Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/iterator:341:10: fatal error: 

      '__debug' file not found

#include <__debug>

         ^

1 error generated.

make[3]: *** [src/api/CMakeFiles/BamTools.dir/BamAlignment.cpp.o] Error 1

make[2]: *** [src/api/CMakeFiles/BamTools.dir/all] Error 2

make[1]: *** [all] Error 2

make: *** [.bamtools] Error 2

Your help is appreciated!

delly install • 1.9k views
ADD COMMENTlink modified 4.8 years ago • written 4.8 years ago by from the mountains80
2

Did you try brew install delly?

ADD REPLYlink written 4.8 years ago by RamRS25k
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