Question: Issues installing Delly
gravatar for from the mountains
4.8 years ago by
United States
from the mountains80 wrote:

I'd really prefer to have Delly on my Mac, but I'm having issues with the install. I DLed via directions on this site and "make all" would always get interrupted partway. I tried installing cmake and boost (through homebrew), which made the installation progress further, but not to the end. This is the error i'm at now: 

/Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/iterator:341:10: fatal error: 

      '__debug' file not found

#include <__debug>


1 error generated.

make[3]: *** [src/api/CMakeFiles/BamTools.dir/BamAlignment.cpp.o] Error 1

make[2]: *** [src/api/CMakeFiles/BamTools.dir/all] Error 2

make[1]: *** [all] Error 2

make: *** [.bamtools] Error 2

Your help is appreciated!

delly install • 1.9k views
ADD COMMENTlink modified 4.8 years ago • written 4.8 years ago by from the mountains80

Did you try brew install delly?

ADD REPLYlink written 4.8 years ago by RamRS25k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 730 users visited in the last hour