scripts to filter cuffcompare results

Question

[pengchy]

Hi all,

I want to filter the combined.gtf file produced by cuffcompare and found the script seqscripts/filterCuffcompare.py worked well for this task. However, this package has not been published and the method was written at 4 years ago. I wonder if there any problems for this script and any other people have used this package.

Is there any other alternative package available for this purpose?

Thank you!