Mapmi error, no alignments found.
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7.9 years ago
The Last Word ▴ 230

I am using the MapMi miRNA prediction software developed by the Enright Group of EBI. I downloaded MapMi, got all the dependencies sorted and tried running the software with a custom genome I have. I edited the configuration file and tried matching all the miRNAs in miRBase (~28,000) to find any matches in my genome. However, I get no alignments whatsoever which I find highly unlikely. Please suggest as to what I could be doing wrong. I will upload my files via dropbox.

My custom genome:

My configuration file:

MapMi Dust • 1.5k views

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