Are there any validated variants for bacterial datasets?
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Entering edit mode
7.6 years ago
mgalactus ▴ 760

Hi,

for human data there is at least on set of known variants for which benchmarks with different variant callers can be run (described here for example). Is there anything remotely similar for bacterial datasets? So far I couldn't find any example.

Thanks,

Marco

bacteria variant SNP validation SNP calling • 1.6k views
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