I have a set of SNPs resident in 3'UTRs. I would be grateful to obtain information on a public access utility that would permit me to easily search for overlap of the SNP loci with validated or predicted miRNA binding sites. If so, is there a way to estimate the magnitude of the consequence (predicted alterations in binding affinity) caused by nucleotide substitution? I would like to:
- Enter the rs numbers
- Obtain output indicating whether the SNP resides in an miRNA binding site -- if so, estimate the impact of a given nucleotide variant in this position.