I would like to run GISTIC 2.0 on genome data aligned to mouse mm10 reference genome. I could not find mm10 supporting file for running the analysis. Can any one suggest how to create mm10 supporting file for GISTIC 2.0?
Could you please share how you ran GISTIC in your BAM files.
Did any of you find the answer how to run GISTIC for non-human data? Please share.
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