The AMOS framework provides a nice environment for sequence and assembly handling. There are things it can't do however, eg. editing or reassembling contig data. In my lab this is done mostly with Lasergene's SeqMan, which is able to import ACE files.
So, what I would like to do is convert my preprocessed AMOS bank to the ACE file format. There is an amos2ace converter available, but that one can only work on AMOS message files (afg?). Is there a way to do that, either directly or via the afg file format?
Thanks in advance! Michael