Question: GOseq returns different number of genes in category for same gene2cat list
gravatar for muhittinozdemir
5.3 years ago by
muhittinozdemir10 wrote:


I am using GOseq for go term enrichment over 2 strains and 2 conditions. I noticed that the results have something peculiar - or something I am misunderstanding. The results returned from GOseq contains a numInCat column, which I take as number of genes for the given GO category. I expected this to be the same over different comparisons I performed over strains and conditions since gene2cat is the same. However, it differs from comparison to comparison. Could anyone help me understand? 



rna-seq goseq • 1.5k views
ADD COMMENTlink written 5.3 years ago by muhittinozdemir10
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1293 users visited in the last hour