I am using IDBA-ud to assembly reads from an exome sequencing. I would like to access to the name of each read which compose a contig. Is there an option or a way to have these informations?
Thank you very much.
You can map your reads to the contigs with e.g. bwa.
Of course but it would be faster if IDBA-ud give it directly. But if it doesn't I will have to do something like that, yes.
Login before adding your answer.
Use of this site constitutes acceptance of our User Agreement and Privacy