Question: Does FragGeneScan find complete ORFs?
gravatar for jolespin
5.0 years ago by
United States
jolespin130 wrote:

I'm curious how FragGeneScan finds open reading frames.  The three ways I could think of are below...does anybody know which one it is? 

A) find the coding sequence only (e.g. ATG-xxx-xxx-STOP);
B) find a segment of the coding sequence only (e.g. ATG-xxx-xx or xxx-xxx-STOP); or
C) the entire gene including the 5’ and 3’UTR sequences (e.g. 55555-ATG-xxx-xxx-STOP-3333)

ADD COMMENTlink modified 5.0 years ago by Biostar ♦♦ 20 • written 5.0 years ago by jolespin130
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