How to prepare RNA-seq data for Piano?

Question

[Parham]

Hi,

I want to use Piano package for RNA-seq data but I cannot figure out how to prepare read counts for Piano package. It only mentioned preparation for microarray data in the Piano package and I am not familiar with that neither. Can some one give a bit of help on it or send a link to a more detailed protocol.

Thanks in advance!

[Biomonika (Noolean)]

Please provide links to the manual/software.