Question: (Closed) Illumina read simulator with insert size distribution and PCR duplicates?
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gravatar for 14134125465346445
4.6 years ago by
United Kingdom
141341254653464453.5k wrote:

Is there a software simulator of Illumina data that would include:

1. Simulation of a give insert size distribution

2. Simulation of PCR duplicates

I have been googling for it, and found EAGLE, wgsim and a few others, but I haven't found one that explicitly allows to fix the number of starting fragments or the percent PCR duplicates and generate a bam file.

Any ideas?

illumina • 1.7k views
ADD COMMENTlink written 4.6 years ago by 141341254653464453.5k

Hello 14134125465346445!

Duplicate post, there are suggestions elsewhere on the site for alternatives to wgsim

What Ngs Read Simulators Are Available For Paired-End Data?

ADD REPLYlink modified 4.6 years ago • written 4.6 years ago by Daniel Swan13k
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