So I have some differential methylation data generated through bisulfite sequencing. I have a only 8 deferentially methylated positions and none of the map to a transcription factor binding site. What are some other ways to interrogate the data? I've used CADD and FATHMM to generate conservation scores, etc. But that does not give me much functional info. I've seen that there is some mapping to histone enhancer regions H3K4Me3, etc. But I honestly do not really understand what that means. Any help is greatly appreciated!!!!!
Thanks in advance