I am looking for novel sequence insertions identified in the 1000 genomes project, and I found 3 files in this directory:
ftp://ftp.ebi.ac.uk/pub/databases/dgva/estd59_Durbin_et_al_2010/gvf/estd59_Durbin_2010_highquality_novel_sequence_insertion_pilot2.gvf ftp://ftp.ebi.ac.uk/pub/databases/dgva/estd59_Durbin_et_al_2010/gvf/estd59_Durbin_2010_highquality_mobile_element_insertion_pilot1.gvf ftp://ftp.ebi.ac.uk/pub/databases/dgva/estd59_Durbin_et_al_2010/gvf/estd59_Durbin_2010_highquality_mobile_element_insertion_pilot2.gvf
It seems for non-mobile element insertions, there is only about 400 novel sequence insertions. Is there any other place where I can find more?
EDIT: for mobile elements, Casey Bergman's answer seems to be the best out there. Still, out of 7830 entries in the table, only 3089 sequences are given for the predictions in this table, the rest being blank.