How to build a minimum spanning trees from the local WGS NextGene processing results?
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7.2 years ago
vassialk ▴ 200

How to build a minimum spanning trees from the local WGS NextGene processing results? Need to find a proper way to visualize postprocessing results of WGS NextGene software data. I have aligned a set of 144 MDR tuberculosis against a Beijing reference and want to report data correctly with charts, tables and plots, etc. to perform a microevolution analysis. Please, advise tools and approaches.  NextGene lacks several visualization capabilities, though it is a perfect aligner and VCF productor.

Thanks.

wgs sequencing • 1.8k views
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Isn't NextGene a commercial product? If so, you should ask the company this.

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