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It should be great if I have any assistance in my build up command using trinity package...
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I want reads in a specific short interval, but if I do that with samtools view I also get reads that are spliced over that interval.
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Hello,
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this is names.dmp:![names.dmp][1]
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see also : https://www.biostars.org/p/9537698/ ; https://www.biostars.org/p/9464312/ ; https://www.biostars.org/p/417123/
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what's the gray section ? it's the read you want ? do you only want the reads that end at the splice event (single point location) ?
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