Entering edit mode
8.7 years ago
tigeradab
▴
60
I am able to retrieve ka/ks ratio for a multiple sequence alignment using the model=0 and NSsites=0 in the .ctl file of PAML. But, I also require the individual ka and ks values for the whole alignment. Is it possible to retrieve this from PAML? If yes, then what parameter should I change in the .ctl file?