Entering edit mode
12.4 years ago
Ryan Thompson
★
3.6k
I'm having trouble locating documentation on what substitution matrices are supported by command-line BLAST+ tools. Do they have a specific set of matrices built in? Are they hidden in a directory somewhere? Can I add my preferred one if it is not supported by default?
In particular, I'd like to use the BLOSUM100 matrix, because I want higher mismatch penalties.
