Marmoset Mrna Details Via Ucsc Mysql Database

Question

[Chami]

I currently access the UCSC 'refFlat' table to extract human mRNA details namely ; mRNA name, Start coordinate and End coordinate.

I want the same information regarding the Marmoset mRNAs.

My primary need is to BLAST a sequence segment , get its coordinate and see whether a mRNA is present in the location.

Thanks in advance.

[Sean Davis]

I believe Marmoset is called calJac3 at UCSC. You could probably access it in the same way as human. So, I'm not sure what your question actually is. Could you clarify?