Thank U guys , lately I found myself lost in how to use the Mapsplice tools.
Here is the need of MapSplice:
The directory containing the sequence files of reference genome. All sequence files are required to:
- In "FASTA" format, with '.fa' extension.
- One chromosome per sequence file.
- Chromosome name in the header line ('>' not included) is the same as the sequence file base name, and does not contain any blank space.
- E.g. If the header line is '>chr1', then the sequence file name should be 'chr1.fa'.
I only have the whole Genome file which is human.fa ，how can I get the seperately files? Thank U！