Question: Error while running computeMatrix of deepTools
0
gravatar for Prakash
5.3 years ago by
Prakash2.0k
India
Prakash2.0k wrote:

Hello everyone

I am using computeMatrix tools of deepTools and I am getting this error..can any help me solving this

Traceback (most recent call last):
  File "/usr/bin/computeMatrix", line 157, in <module>
    main(args)
  File "/usr/bin/computeMatrix", line 139, in main
    parameters, verbose=args.verbose)
  File "/usr/lib/python2.7/site-packages/deeptools/heatmapper.py", line 99, in computeMatrix
    mp_args).get(9999999)
  File "/usr/lib64/python2.7/multiprocessing/pool.py", line 554, in get
    raise self._value
ValueError: numpy.dtype has the wrong size, try recompiling

Thanks in advance

Gyan

 

chip-seq • 2.2k views
ADD COMMENTlink modified 5.3 years ago by Pierre Lindenbaum131k • written 5.3 years ago by Prakash2.0k

Apparently, you have a problem with numpy installation. As suggested in the error message, try to re-install it or upgrade it. This post may help you: http://stackoverflow.com/questions/17709641/valueerror-numpy-dtype-has-the-wrong-size-try-recompiling

 

ADD REPLYlink written 5.3 years ago by Fidel2.0k
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