Is there a database linking cell lines and mutations?
1
0
Entering edit mode
8.6 years ago
joedever42 ▴ 20

Hi,

I am trying to find a good solution for linking together information about

  1. cell lines
  2. mutations

Ideally I would need a database which will tell me:

  1. all mutations for a given cell line
  2. all cell lines with a specific mutation

If there anything already available off the shelf?

If not, which databases could I try to bash together to get what I need?

variants annotations cell-lines database • 7.6k views
ADD COMMENT
2
Entering edit mode
8.6 years ago
arno.guille ▴ 410

Hi,

http://www.cbioportal.org/ contains NCI-60 Cell Lines (NCI, Cancer Res. 2012) and Cancer Cell Line Encyclopedia (Novartis/Broad, Nature 2012) dataset with mutation data.

Hope this helps

ADD COMMENT
0
Entering edit mode

Thank you, it's one hour that I seek, your link helps me a lot.

Romain (sorry for my bad English)

ADD REPLY

Login before adding your answer.

Traffic: 2711 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6