Hi, I am about to receive pac bio data and need to perform de novo assembly on the data.
I am looking into using HGAP from the Smrt Analysis package. However, this package is absolutely huge according to what I have found online (1TB?).
I only want to use HGAP. Is there anyway to JUST download HGAP, without installing the giant Smart Analysis package? If anyone could help me at all it would be much appreciated, thank you! (Or point me toward a different software for de novo assembly from pac bio data).