Hi, I've obtained the arabidopsis gene list in fasta format from ensembl and I was wondering whether coordinates from genes on the negative strand such as I think, this one..
>ATMG01410.1 cdna:known chromosome:TAIR10:Mt:366086:366700:-1 gene:ATMG01410 transcript:ATMG01410.1 description:"Uncharacterized mitochondrial protein AtMg01410"
have to be converted to positive strand coordinates or are they all the same positive strand coordinates? I assume the coordinates are 366086:366700. Do you have to do anything with them or can they simply be plugged right into a genome browser?