Hello there.. I am intending to build a web application that will retrieve data from PPI databases, Pfam, GO, UniProt and PDB. All these will be integrated on a single database and web application will be connected to that database. Hence, when I want to query a specific protein, I want to get the PPI network representation of that protein and all other biological information from these databases.
I intend to use Jmol to view the 3D structure of the protein and Cytoscape to display the protein network interactions. My question is how do I embed Jmol and Cytoscape on my web page ? Note that I'll be using PHP for server-side processing.