Question: what is meaning of bwa index output
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gravatar for alexqdh
3.2 years ago by
alexqdh0
Netherlands
alexqdh0 wrote:

When I run bwa index, it generate these file(.amb, .ann, .bwt, .pac, .sa), amb and ann seems annotation, bwt, pac and sa are all binary file, what is the difference between them?

I read the code, there exist some abbreviation, such as bns_fasta2bntseq, what is the bns and bnt meaning?

Thank you.

bwa • 1.5k views
ADD COMMENTlink modified 3.2 years ago by Biostar ♦♦ 20 • written 3.2 years ago by alexqdh0
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