Question: The first amplicon librariesis is needed to analyse the 16S data?
0
gravatar for m.koohi.m
3.1 years ago by
m.koohi.m80
United States
m.koohi.m80 wrote:

Hi,

For analyzing 16S data with Mothur or Qiime is it necessary that I have the the first amplicon libraries sequences or not? The data is produced by MiSeq illumina multiplexing technology and the barcode of each sample is provided by the lab.

Best

 

sequencing next-gen genome • 848 views
ADD COMMENTlink modified 3.1 years ago by glihm570 • written 3.1 years ago by m.koohi.m80
2
gravatar for glihm
3.1 years ago by
glihm570
France
glihm570 wrote:

Hi, 

if you are looking for OTUs from sequencing data in order to compare microbial communities in your samples, you will only need FastQ files from sequencing. 

ADD COMMENTlink modified 3.1 years ago • written 3.1 years ago by glihm570
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2081 users visited in the last hour