Question: performance assessment of gene regulatory networks
1
gravatar for F
3.5 years ago by
F3.4k
Iran
F3.4k wrote:

hello all

supposing im going to infer gene regulatory network with various methods (correlation-based, mutual information,regression and bayesian) for RNA-seq data sets but there is not a gold standard for arabidopsis (my interest organism), then how i can evaluate the accuracy and performance of these methods to compare them???

thanks

myposts rna-seq grn • 780 views
ADD COMMENTlink modified 3.5 years ago by Devon Ryan89k • written 3.5 years ago by F3.4k
1
gravatar for Devon Ryan
3.5 years ago by
Devon Ryan89k
Freiburg, Germany
Devon Ryan89k wrote:

The same way you evaluate anything else, find apparently meaningful differences between them and test them experimentally.

ADD COMMENTlink written 3.5 years ago by Devon Ryan89k
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