Question: performance assessment of gene regulatory networks
1
gravatar for A
4.3 years ago by
A3.7k
A3.7k wrote:

hello all

supposing im going to infer gene regulatory network with various methods (correlation-based, mutual information,regression and bayesian) for RNA-seq data sets but there is not a gold standard for arabidopsis (my interest organism), then how i can evaluate the accuracy and performance of these methods to compare them???

thanks

myposts rna-seq grn • 914 views
ADD COMMENTlink modified 4.3 years ago by Devon Ryan93k • written 4.3 years ago by A3.7k
1
gravatar for Devon Ryan
4.3 years ago by
Devon Ryan93k
Freiburg, Germany
Devon Ryan93k wrote:

The same way you evaluate anything else, find apparently meaningful differences between them and test them experimentally.

ADD COMMENTlink written 4.3 years ago by Devon Ryan93k
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