Entering edit mode
8.5 years ago
andreavidaldura
•
0
Hi all,
I am currently doing alpha diversity analysis of individual samples (sequenced by Illumina). I am playing with the Usearch commands and I have some questions about the -fasta_diversity
command:
- In the output file what are the two first columns (Pct and N)?
- What means exactly the -iters option suggested in the example: http://drive5.com/usearch/manual/cmd_fasta_diversity.html
I found that it means number of iterations to try for each subset size but I don't really know what it does here.
Thank you everybody!