Question: Whole Blood Samples of Cancer Patients from TCGA?
0
gravatar for dog.seal6363
4.6 years ago by
United States
dog.seal63630 wrote:

Hi,

I was wondering if anyone knows how I could obtain the SNP data from whole blood samples of cancer patients from TCGA. I tried using the Biospecimen Metadata Browser, but I had no results. 

 

Thank you for answering my question. 

 

 

snp • 1.8k views
ADD COMMENTlink modified 4.6 years ago by CY470 • written 4.6 years ago by dog.seal63630
0
gravatar for CY
4.6 years ago by
CY470
United States
CY470 wrote:

If you want mutation data of patients from TCGA, you can go to https://tcga-data.nci.nih.gov/tcga/ or their FTP site for downloading. However, that is mutation mutation data. The SNP you refered is germline mutation and ,as far as I know, there is no germline mutation data for TCGA patient. Please correct me if I am wrong.

ADD COMMENTlink modified 6 months ago by RamRS27k • written 4.6 years ago by CY470

Hi CY. Do you know how to download all the mutation information for 10202 TCGA samples. I only know how to download it for individual gene.

ADD REPLYlink written 9 months ago by Shicheng Guo8.2k
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