Existing Tools For Viewing A De Bruijn Graph From Raw Reads

Question

[kshitijtayal]

I understand that there are plethora of tools available where you enter the read file and the software will internally build the De bruijn graph and will display the assembled genome.

I want to actually see the debruijn graph that has been constructed from the read file. Is there any tool available where you can actually view the graph from the raw-reads.

Answer 1

[h.mon]

Have a look at Bandage.

[kshitijtayal]

Thank you for introducing me to this great tool. It would be of great help. However i have a doubt of mine that i would like to clarify . Bandage only supports loading assembled graph only. If i have a read file and want to view De briujn graph directly, it is impossible using Bandage. For bandage you should have a assembled graph. Correct me if i am wrong.