What is an Example of Protein that has Bissulfosuccinimidyl suberate Cross-linker?
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6.0 years ago
Bahrani ▴ 30

Hello Scientists!

I want to know what are the known proteins that have Bissulfosuccinimidyl suberate cross-linker (BS3) in their structures?  Is there any way to make such query in the protein structure databases such as PDB?  I have tried doing the search in PDB using the "Text Search" option in the advanced search interface to search for the BS3 keyword; however, the result returns all the PDB records where the keyword "BS3" is mentioned and that is still irrelevant because my aim is to look for the BS3 cross-linker in the "ATOM" section of the PDB record not in the description or elsewhere, for example.

So, my question is that can we make a specific query that allows to search for "BS3" keyword in the ATOM section of PDB records in the database? or do you have any idea to solve such problem?

     

 

protein structure PDB ATOM query • 1.5k views
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