Question: adegent for Tajima's D:
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biobudhan • 20 wrote:
Hello everyone,
I am trying to use adegent in R for calculating the Tajima's D. I have a DNA.bin object containing my sequences from different populations. The sequences are of varying length because of the SNP and indels in them. I get the following error when I run the tajima.test function:
Error in as.matrix.DNAbin(x) :
DNA sequences in list not of the same length.
How could one deal with calculating Tajima's D for sequences of different length?
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modified 3.6 years ago
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Brice Sarver • 2.6k
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written
3.6 years ago by
biobudhan • 20
