human Natural Antisense Transcript database
0
0
Entering edit mode
8.5 years ago
Martombo ★ 3.1k

does anybody know of a reliable database for human Natural Antisense Transcripts (NATs)?

I found a couple databases with google: NATsDB and antiCODE. Neither was updated recently and the download page of the former doesn't work, while the latter doesn't even have one.

I would like to see if there is an enrichment for such transcripts in some RNA-seq results and while I could perform an analysis to detect NATs, a database would be more straightforward.

database • 2.0k views
ADD COMMENT
0
Entering edit mode

also, if I understood correctly, Ensembl only classifies non-coding transcripts as "antisense", while NATs can also be protein-coding.

ADD REPLY

Login before adding your answer.

Traffic: 2925 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6